Type: Package
Package: cuperdec
Title: Cumulative Percent Decay Curve Generator
Version: 1.1.0.9000
Authors@R: 
    person(given = "James A.",
           family = "Fellows Yates",
           role = c("aut", "cre"),
           email = "jfy133@gmail.com",
           comment = c(ORCID = "0000-0001-5585-6277"))
Description: Calculates and visualises cumulative percent 'decay'
        curves, which are typically calculated from metagenomic
        taxonomic profiles. These can be used to estimate the level of
        expected 'endogenous' taxa at different abundance levels
        retrieved from metagenomic samples, when comparing to samples
        of known sampling site or source. Method described in Fellows
        Yates, J. A. et. al. (2021) Proceedings of the National Academy
        of Sciences USA <doi:10.1073/pnas.2021655118>.
License: MIT + file LICENSE
URL: https://github.com/jfy133/cuperdec
BugReports: https://github.com/jfy133/cuperdec/issues
Depends: R (>= 3.5.0)
Imports: dplyr, ggplot2, magrittr, readr, rlang, tidyr
Suggests: knitr, rmarkdown, testthat, tibble
VignetteBuilder: knitr
Encoding: UTF-8
Language: en-GB
LazyData: true
NeedsCompilation: no
RoxygenNote: 7.1.2
Config/pak/sysreqs: libicu-dev libx11-dev
Repository: https://jfy133.r-universe.dev
Date/Publication: 2022-09-12 10:53:39 UTC
RemoteUrl: https://github.com/jfy133/cuperdec
RemoteRef: HEAD
RemoteSha: b06243e629983f76e4d24d493ac706fe67f6cd5b
Packaged: 2026-06-22 08:02:04 UTC; root
Author: James A. Fellows Yates [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-5585-6277>)
Maintainer: James A. Fellows Yates <jfy133@gmail.com>